STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014960Short coiled-coil protein a. (73 aa)    
Predicted Functional Partners:
ENSGMOP00000019101
Fasciculation and elongation protein zeta 1 (zygin I).
   
 
 0.800
ENSGMOP00000000891
Si:dkey-288i20.2.
   
 
 0.799
ENSGMOP00000001637
Si:ch211-57i17.1.
   
 
 0.799
arl1
ADP ribosylation factor like GTPase 1.
   
 
 0.764
ENSGMOP00000009881
annotation not available
   
 
 0.729
ENSGMOP00000019025
Proteasome 26S subunit, ATPase 5.
    
   0.591
ENSGMOP00000001608
ADP ribosylation factor like GTPase 3b.
     
 0.542
arfrp1
ADP ribosylation factor related protein 1.
      
 0.527
ENSGMOP00000012926
annotation not available
      
 0.517
ENSGMOP00000007542
Discs, large (Drosophila) homolog-associated protein 3.
      
 0.516
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.