STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000015161Era-like 12S mitochondrial rRNA chaperone 1. (342 aa)    
Predicted Functional Partners:
ENSGMOP00000001630
Mitochondrial ribosomal protein S16.
   
 0.996
ENSGMOP00000004928
Mitochondrial ribosomal protein S7.
   
 0.996
ENSGMOP00000020389
Death associated protein 3.
    
 0.996
ENSGMOP00000008507
Mitochondrial ribosomal protein S15.
   
 0.994
ENSGMOP00000014929
Mitochondrial ribosomal protein S22.
    
 0.994
ENSGMOP00000015239
Mitochondrial ribosomal protein S10.
  
 0.994
ENSGMOP00000021297
Mitochondrial ribosomal protein S6.
   
  0.994
ENSGMOP00000017115
Mitochondrial ribosomal protein S26.
    
 0.993
ENSGMOP00000002495
Pentatricopeptide repeat domain 3.
    
 0.992
ENSGMOP00000008615
Mitochondrial ribosomal protein S5.
  
 0.992
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.