STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000015310Torsin family 3, member A. (368 aa)    
Predicted Functional Partners:
cops4
COP9 signalosome subunit 4.
   
  0.666
ENSGMOP00000017279
General transcription factor IIA, 1-like.
    
  0.662
cops2
COP9 signalosome subunit 2.
   
 
  0.604
ENSGMOP00000000678
COP9 signalosome subunit 8.
   
 
  0.577
COPS6
COP9 signalosome subunit 6.
   
 
  0.565
ENSGMOP00000008229
RFT1 homolog.
      
 0.519
ENSGMOP00000013373
Mitochondrial ribosomal protein S18A.
      
 0.517
ENSGMOP00000000839
annotation not available
      
 0.461
ENSGMOP00000014892
Centrosomal protein 350.
      
 0.430
ENSGMOP00000019444
Ependymin related 1.
      
 0.412
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.