STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000015314Serine threonine kinase 39. (475 aa)    
Predicted Functional Partners:
ENSGMOP00000013419
SEC62 homolog, preprotein translocation factor.
    
 
 0.947
LOC115537069
Protein transport protein Sec61 subunit gamma; Necessary for protein translocation in the endoplasmic reticulum.
   
 
 0.881
LOC115549125
Protein transport protein Sec61 subunit gamma-like.
   
 
 0.881
sec61b
SEC61 translocon beta subunit.
    
 
 0.880
ENSGMOP00000001097
SEC63 homolog, protein translocation regulator.
    
 
 0.878
SEC61A1
SEC61 translocon alpha 1 subunit.
    
 
 0.877
ENSGMOP00000009929
SEC61 translocon alpha 1 subunit, like.
    
 
 0.877
ENSGMOP00000015094
Calcium binding protein 39.
   
 0.781
ENSGMOP00000018207
annotation not available
   
 0.781
ENSGMOP00000013164
A kinase (PRKA) anchor protein 8-like.
    
 0.728
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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