STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115538019SUMO-conjugating enzyme UBC9-like. (158 aa)    
Predicted Functional Partners:
ENSGMOP00000007553
RAN binding protein 2.
   
 0.998
ENSGMOP00000006264
annotation not available
   
 0.992
ENSGMOP00000004426
Ubiquitin-like modifier activating enzyme 2.
   
 0.979
ENSGMOP00000001562
SUMO1 activating enzyme subunit 1.
  
 0.968
RANGAP1
Ran GTPase activating protein 1.
   
 0.952
ENSGMOP00000014328
Ran GTPase activating protein 1b.
   
 0.952
ENSGMOP00000008238
RAN binding protein 1.
   
 0.949
ENSGMOP00000021004
annotation not available
   
 0.945
ENSGMOP00000018668
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.944
pcna
Proliferating cell nuclear antigen.
   
 0.943
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.