STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000015415Uracil DNA glycosylase a. (258 aa)    
Predicted Functional Partners:
ENSGMOP00000011412
Nth-like DNA glycosylase 1.
   
 0.943
pcna
Proliferating cell nuclear antigen.
  
 
 0.910
ENSGMOP00000020854
Damage-specific DNA binding protein 1.
    
 
 0.903
ENSGMOP00000008488
APEX nuclease (multifunctional DNA repair enzyme) 1.
  
 0.886
ENSGMOP00000000505
annotation not available
    
 
 0.882
DCAF1
DDB1 and CUL4 associated factor 1.
    
 
 0.882
ENSGMOP00000021168
APEX nuclease (apurinic/apyrimidinic endonuclease) 2.
  
 0.863
ENSGMOP00000016869
Replication protein A2.
   
 
 0.816
ENSGMOP00000002363
Beta-2-microglobulin, like.
   
 
 0.815
ENSGMOP00000014082
Si:ch211-141o9.10.
   
 
 0.810
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.