STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000015438seryl-tRNA synthetase 2, mitochondrial. (508 aa)    
Predicted Functional Partners:
PSTK
phosphoseryl-tRNA kinase.
     
 0.930
ndufab1
NADH:ubiquinone oxidoreductase subunit AB1.
   
 
 0.895
ENSGMOP00000006968
tyrosyl-tRNA synthetase 1.
  
  
 0.863
sars1
seryl-tRNA synthetase 1.
  
  
 
0.853
ENSGMOP00000016009
valyl-tRNA synthetase 1.
  
 
 0.846
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.827
ENSGMOP00000020984
annotation not available
  
 
 0.827
ENSGMOP00000002021
tryptophanyl-tRNA synthetase 1.
  
 
 0.816
ENSGMOP00000002784
lysyl-tRNA synthetase 1.
  
 
 0.816
ENSGMOP00000016900
phenylalanyl-tRNA synthetase 2, mitochondrial.
  
 
 0.808
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.