STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000015527annotation not available (4444 aa)    
Predicted Functional Partners:
ENSGMOP00000008562
Dynactin 2 (p50).
    
 0.878
ENSGMOP00000014730
Dynactin 1a.
   
 0.859
ENSGMOP00000015372
Dynactin 1b.
   
 0.859
ENSGMOP00000008911
Dynein, cytoplasmic 2, light intermediate chain 1.
    
 0.858
ENSGMOP00000007408
Platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b.
   
 0.857
PAFAH1B1
Lissencephaly-1 homolog A.
   
 0.857
ENSGMOP00000004942
Dynein, light chain, Tctex-type 3.
    
 0.855
ENSGMOP00000015145
Dynein, light chain, Tctex-type 1.
    
 0.854
ENSGMOP00000002479
Dynein, cytoplasmic 1, intermediate chain 2a.
   
 0.819
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
   
 0.819
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.