STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000015566LIM domain only 3. (156 aa)    
Predicted Functional Partners:
ENSGMOP00000004712
annotation not available
    
 0.890
ENSGMOP00000014621
LIM domain binding 2a.
    
 0.890
ENSGMOP00000021000
LIM-domain binding 1b.
    
 0.890
ENSGMOP00000006228
T-cell acute lymphocytic leukemia 1.
    
 0.819
ENSGMOP00000019351
GATA binding protein 1a.
    
 0.753
ENSGMOP00000003887
GATA binding protein 3.
    
 0.722
GATA2
GATA binding protein 2.
    
 0.707
ENSGMOP00000019077
GATA binding protein 2a.
    
 0.707
ENSGMOP00000009555
Transcription factor 3b.
    
 0.687
ENSGMOP00000013073
Transcription factor 3a.
    
 0.687
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.