STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115540892Neuronal vesicle trafficking-associated protein 1-like. (209 aa)    
Predicted Functional Partners:
ENSGMOP00000018348
annotation not available
   
 0.981
ENSGMOP00000008766
Structural maintenance of chromosomes 5.
    
 0.980
ENSGMOP00000014304
Si:dkey-119f1.1.
    
 0.980
ENSGMOP00000020342
Necdin-like 2.
    
 0.951
ENSGMOP00000022080
annotation not available
    
 0.951
ENSGMOP00000003692
Structural maintenance of chromosomes 1B.
    
 0.865
smc1a
Structural maintenance of chromosomes 1A.
    
 0.865
ENSGMOP00000015738
annotation not available
    
 0.860
ENSGMOP00000015744
annotation not available
    
 0.860
ENSGMOP00000015752
annotation not available
    
 0.860
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.