STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000015666annotation not available (135 aa)    
Predicted Functional Partners:
ENSGMOP00000001629
Rab geranylgeranyltransferase subunit beta.
    
 0.740
ENSGMOP00000006208
Casein kinase 2, beta polypeptide.
   
 
  0.544
ENSGMOP00000005994
AUP1 lipid droplet regulating VLDL assembly factor.
    
   0.520
ENSGMOP00000009528
Cyclin and CBS domain divalent metal cation transport mediator 4a.
    
 
 0.510
ENSGMOP00000009536
annotation not available
    
 
 0.510
CNNM1
Cyclin and CBS domain divalent metal cation transport mediator 1.
    
 
 0.510
ENSGMOP00000016729
Cyclin and CBS domain divalent metal cation transport mediator 2b.
    
 
 0.510
ENSGMOP00000016929
annotation not available
    
 
 0.510
CNNM1-2
Cyclin and CBS domain divalent metal cation transport mediator 1.
    
 
 0.510
ENSGMOP00000004502
annotation not available
   
 
 0.442
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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