STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000015744annotation not available (103 aa)    
Predicted Functional Partners:
ENSGMOP00000003692
Structural maintenance of chromosomes 1B.
   
 0.953
smc1a
Structural maintenance of chromosomes 1A.
   
 0.953
NIPBL
NIPBL cohesin loading factor.
   
 0.939
ENSGMOP00000014718
annotation not available
   
 0.939
ENSGMOP00000015752
annotation not available
 
     0.938
ENSGMOP00000001129
PDS5 cohesin associated factor A.
   
 0.929
ENSGMOP00000005521
PDS5 cohesin associated factor B.
   
 0.929
ENSGMOP00000008100
annotation not available
 
     0.926
ENSGMOP00000011130
non-SMC condensin I complex, subunit D2.
   
 0.920
ENSGMOP00000017416
non-SMC condensin I complex, subunit G.
   
 0.920
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.