STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000015832RAD54 homolog B. (803 aa)    
Predicted Functional Partners:
rad51
RAD51 recombinase.
  
 
 0.936
ENSGMOP00000008299
Excision repair cross-complementation group 6-like 2.
  
0.886
ENSGMOP00000002246
annotation not available
  
 0.876
ENSGMOP00000010053
Vac14 homolog (S. cerevisiae).
 
  
   0.871
ENSGMOP00000013749
Helicase-like transcription factor.
  
0.843
ENSGMOP00000015616
RAD54 like.
  
  
 
0.836
ENSGMOP00000009249
MUS81 structure-specific endonuclease subunit.
  
 0.820
ENSGMOP00000003466
RAD51 paralog D.
  
 
 0.809
ENSGMOP00000011364
annotation not available
   
 
 0.802
ENSGMOP00000013985
DNA meiotic recombinase 1.
  
 
 0.799
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.