STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR7WD repeat domain 7. (1443 aa)    
Predicted Functional Partners:
ENSGMOP00000009303
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.997
ENSGMOP00000018171
Tetratricopeptide repeat domain 37.
    
 0.900
ENSGMOP00000006330
SKI2 homolog, superkiller viralicidic activity 2-like.
    
 0.893
cdc73
Cell division cycle 73.
    
 0.876
ENSGMOP00000011025
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.860
ENSGMOP00000020854
Damage-specific DNA binding protein 1.
    
 0.800
ENSGMOP00000005432
annotation not available
   
 0.794
ENSGMOP00000002199
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.790
ENSGMOP00000008717
Cyclin-dependent kinase 2 interacting protein.
    
 0.790
ENSGMOP00000015781
Mtr4 exosome RNA helicase.
    
 0.779
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.