STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000015918Solute carrier family 45 member 2. (375 aa)    
Predicted Functional Partners:
ENSGMOP00000000325
Forkhead box D1.
    
 
 0.608
ENSGMOP00000002461
Forkhead box L1.
    
 
 0.539
ENSGMOP00000002052
Dopachrome tautomerase.
   
 
 0.532
slc24a5
Solute carrier family 24 member 5.
   
  
 0.525
ENSGMOP00000010168
Proteasome 20S subunit beta 2.
   
  
 0.524
ENSGMOP00000004683
Tyrosinase.
   
 
 0.513
TYRP1
Tyrosinase related protein 1.
   
 
 0.475
ENSGMOP00000013226
Tyrosinase-related protein 1a.
   
 
 0.475
ENSGMOP00000002869
annotation not available
      
 0.463
ENSGMOP00000001700
Premelanosome protein a.
   
  
 0.462
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.