STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000015921KAT8 regulatory NSL complex subunit 1a. (945 aa)    
Predicted Functional Partners:
ENSGMOP00000012281
KAT8 regulatory NSL complex subunit 2.
    
 0.969
ENSGMOP00000006196
KAT8 regulatory NSL complex subunit 3.
    
 0.951
mcrs1
Microspherule protein 1.
    
 0.906
LOC115532099
WD repeat-containing protein 5.
    
 0.867
ENSGMOP00000017672
annotation not available
    
 0.867
ENSGMOP00000012777
annotation not available
    
 0.863
ENSGMOP00000018942
PHD finger protein 20, a.
    
 0.863
ENSGMOP00000012409
WD repeat and SOCS box containing 2.
    
 0.844
ENSGMOP00000019524
WD repeat and SOCS box containing 1.
    
 0.844
ENSGMOP00000016343
K(lysine) acetyltransferase 8.
   
 0.821
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.