STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000015943Abhydrolase domain containing 16A. (545 aa)    
Predicted Functional Partners:
ENSGMOP00000019479
Histocompatibility (minor) 13.
   
 
 0.519
ENSGMOP00000015048
Phosphatidylserine decarboxylase.
      
 0.516
RNF5
Ring finger protein 5.
    
 
 0.507
ENSGMOP00000004646
ATP synthase membrane subunit c locus 3b.
    
 
 0.471
ENSGMOP00000004696
Abhydrolase domain containing 12.
      
 0.459
ENSGMOP00000011444
Prolyl endopeptidase.
      
 0.434
abhd11
Abhydrolase domain containing 11.
      
 0.432
ift81
Intraflagellar transport 81.
      
 0.422
ENSGMOP00000001389
Ring finger protein 185.
    
 
 0.409
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.