STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000015960Fibromodulin a. (340 aa)    
Predicted Functional Partners:
ENSGMOP00000019803
Transforming growth factor, beta 1a.
    
 0.901
TGFB3
Transforming growth factor beta 3.
   
 0.878
ENSGMOP00000016328
Transforming growth factor, beta 3.
   
 0.878
ENSGMOP00000009451
Transforming growth factor, beta 5.
    
 0.864
ENSGMOP00000018664
Transforming growth factor, beta 2.
    
 0.864
ENSGMOP00000017925
Fibromodulin b.
  
  
 
0.847
ENSGMOP00000013570
Lumican.
  
 
0.807
ENSGMOP00000000579
annotation not available
    
   0.780
ENSGMOP00000000599
annotation not available
    
   0.780
ENSGMOP00000002327
Si:ch1073-186i23.1.
    
   0.780
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.