STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000015972Ribosomal protein L23a. (153 aa)    
Predicted Functional Partners:
ENSGMOP00000000113
Ribosomal protein S10.
   
 
 0.999
ENSGMOP00000000531
Mitochondrial ribosomal protein L27.
  
 
 0.999
ENSGMOP00000000826
Receptor for activated C kinase 1.
   
 
 0.999
rps3
Ribosomal protein S3.
  
 
 0.999
ENSGMOP00000001035
Ribosomal protein L9.
  
 0.999
ENSGMOP00000001630
Mitochondrial ribosomal protein S16.
  
 
 0.999
rpl39
Ribosomal protein L39.
  
 0.999
rps3a
Ribosomal protein S3A.
   
 0.999
ENSGMOP00000001913
Ribosomal protein S16.
  
 0.999
ENSGMOP00000001973
Ribosomal protein L35a.
   
 0.999
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.