STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000015977Peroxisomal biogenesis factor 16. (325 aa)    
Predicted Functional Partners:
ENSGMOP00000020023
Peroxisomal biogenesis factor 19.
    
 0.975
ENSGMOP00000004519
Peroxisomal biogenesis factor 3.
    
 0.905
ENSGMOP00000006573
Peroxisomal biogenesis factor 14.
    
 0.862
ENSGMOP00000013948
Peroxisomal biogenesis factor 11 alpha.
   
 
 0.858
ENSGMOP00000009746
Peroxisomal biogenesis factor 12.
     
 0.856
ENSGMOP00000020470
Peroxisomal biogenesis factor 13.
     
 0.854
ENSGMOP00000016263
ATP-binding cassette, sub-family D (ALD), member 3a.
     
 0.831
ENSGMOP00000019870
Family with sequence similarity 185 member A.
    
 0.824
ENSGMOP00000002086
Peroxisomal biogenesis factor 2.
     
 0.816
ENSGMOP00000001416
Peroxisomal biogenesis factor 11 gamma.
   
 
 0.815
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.