STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016021ADP-ribosylation factor-like 6 interacting protein 1. (114 aa)    
Predicted Functional Partners:
ENSGMOP00000012718
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
 0.999
rps3
Ribosomal protein S3.
  
 0.995
ENSGMOP00000004739
Eukaryotic translation initiation factor 1A X-linked b.
  
 0.995
ENSGMOP00000005457
Si:dkey-159f12.2.
  
 0.995
rps18
Ribosomal protein S18.
  
 0.995
rps2
Ribosomal protein S2.
  
 0.995
RPS20
Ribosomal protein S20.
  
 0.995
rps3a
Ribosomal protein S3A.
   
 0.994
ENSGMOP00000001913
Ribosomal protein S16.
  
 0.994
rps9
Ribosomal protein S9.
  
 0.994
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.