STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016061Transforming growth factor beta regulator 1. (368 aa)    
Predicted Functional Partners:
ENSGMOP00000016489
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.894
ENSGMOP00000010770
Retinoblastoma binding protein 5.
    
 0.892
ENSGMOP00000011642
Centromere protein N.
   
 0.811
ENSGMOP00000001468
annotation not available
    
  0.778
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
    
  0.778
LOC115545231
5'-AMP-activated protein kinase subunit beta-1-like.
    
  0.778
ENSGMOP00000004222
Lysine (K)-specific demethylase 6B, a.
   
 0.744
ENSGMOP00000005013
annotation not available
   
 0.744
ENSGMOP00000007617
Lysine (K)-specific demethylase 6A.
   
 0.744
ENSGMOP00000002131
PR domain containing 4.
   
 0.710
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.