STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016139Paraspeckle component 1. (515 aa)    
Predicted Functional Partners:
ENSGMOP00000010398
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.609
ENSGMOP00000009149
annotation not available
    
  0.555
ENSGMOP00000009159
annotation not available
    
  0.555
LOC115544021
Tyrosine-protein kinase fyna.
    
  0.555
ENSGMOP00000016741
Yes-related kinase.
    
  0.555
ENSGMOP00000003023
Nudix hydrolase 21.
   
 
 0.517
ENSGMOP00000018304
TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 
 0.498
ENSGMOP00000010289
RNA binding motif protein 14b.
   
 
0.494
ENSGMOP00000013128
EWS RNA-binding protein 1b.
   
 
 0.471
ENSGMOP00000020468
Matrin 3-like 1.1.
   
 
 0.460
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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