STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016151annotation not available (576 aa)    
Predicted Functional Partners:
ENSGMOP00000003438
ephrin-B1.
    
 0.743
ENSGMOP00000010622
ephrin-B2a.
    
 0.743
ENSGMOP00000019247
ephrin-B3a.
    
 0.743
gnb5
G protein subunit beta 5.
   
 0.738
ENSGMOP00000017605
annotation not available
   
 0.738
pde6g
Phosphodiesterase 6G.
    
 0.727
ENSGMOP00000001117
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.717
gnat1
G protein subunit alpha transducin 1.
   
 0.717
ENSGMOP00000003420
annotation not available
    
 0.714
ENSGMOP00000001132
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.
   
 0.712
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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