STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016180Carnitine O-octanoyltransferase. (637 aa)    
Predicted Functional Partners:
ENSGMOP00000012730
Sterol carrier protein 2a.
   
 
 0.795
ENSGMOP00000001743
Peroxisomal biogenesis factor 10.
     
 0.686
ENSGMOP00000009746
Peroxisomal biogenesis factor 12.
     
 0.645
ENSGMOP00000020470
Peroxisomal biogenesis factor 13.
     
 0.636
ENSGMOP00000013464
Trypsin domain containing 1.
     
 0.620
ENSGMOP00000010080
annotation not available
   
 
 0.615
ENSGMOP00000002872
Peroxisomal biogenesis factor 5-like b.
     
 0.614
ENSGMOP00000016621
Peroxisomal biogenesis factor 5.
     
 0.614
ENSGMOP00000018713
Peroxisomal biogenesis factor 5-like a.
     
 0.614
ENSGMOP00000002086
Peroxisomal biogenesis factor 2.
     
 0.610
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.