STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016199Nucleotide-binding oligomerization domain containing 1. (921 aa)    
Predicted Functional Partners:
ENSGMOP00000017481
Receptor-interacting serine-threonine kinase 2.
   
 0.991
ENSGMOP00000000528
ATG16 autophagy related 16-like 1 (S. cerevisiae).
    
 0.918
ENSGMOP00000019257
annotation not available
    
 0.918
ENSGMOP00000020939
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 0.917
ENSGMOP00000019248
Erbb2 interacting protein.
    
 0.896
ENSGMOP00000004176
Leucine rich repeat containing 7.
    
 0.886
ENSGMOP00000017073
annotation not available
     
 0.881
ENSGMOP00000010387
ATG5 autophagy related 5 homolog (S. cerevisiae).
     
 0.872
ENSGMOP00000004729
ATG12 autophagy related 12 homolog (S. cerevisiae).
     
 0.858
ENSGMOP00000012733
Ribosomal protein S27a.
    
  0.851
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.