STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016308Si:dkey-97o5.1. (908 aa)    
Predicted Functional Partners:
ENSGMOP00000000242
Exonuclease 1.
   
  
 0.622
ENSGMOP00000015068
Kinetochore associated 1.
   
  
 0.618
ENSGMOP00000018052
Thyroid hormone receptor interactor 13.
   
   0.607
ENSGMOP00000008943
Zwilch kinetochore protein.
   
    0.592
ENSGMOP00000001247
PARP1 binding protein.
   
  
 0.577
ENSGMOP00000011388
Zinc finger, FYVE domain containing 28.
      
 0.487
EGFLAM
EGF like, fibronectin type III and laminin G domains.
      
 0.470
ENSGMOP00000012320
Calcineurin binding protein 1.
      
 0.453
ENSGMOP00000014842
Coiled-coil domain containing 181.
      
 0.445
ENSGMOP00000013661
Minichromosome maintenance 8 homologous recombination repair factor.
   
  
 0.432
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.