STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SELESelectin E. (566 aa)    
Predicted Functional Partners:
ENSGMOP00000008309
annotation not available
   
 
 0.882
ENSGMOP00000014536
Golgi glycoprotein 1a.
    
 0.812
ENSGMOP00000020398
annotation not available
    
 0.812
ENSGMOP00000007675
annotation not available
   
 0.784
ENSGMOP00000014037
Sorting nexin 17.
    
 
 0.759
ENSGMOP00000016804
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
0.669
ENSGMOP00000002044
Adaptor related protein complex 2 subunit mu 1b.
    
  0.622
ENSGMOP00000008405
annotation not available
    
  0.622
ENSGMOP00000007775
CD63 molecule.
    
 0.580
ENSGMOP00000014053
annotation not available
   
 0.541
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.