STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016394annotation not available (227 aa)    
Predicted Functional Partners:
ENSGMOP00000000384
annotation not available
 
  
 0.904
ENSGMOP00000016246
annotation not available
    
 0.877
ENSGMOP00000005239
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.874
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.874
ENSGMOP00000014453
Ataxin 1b.
 
  
 0.856
ENSGMOP00000002862
annotation not available
    
 0.833
ENSGMOP00000007359
Pumilio RNA-binding family member 2.
     
 0.826
ENSGMOP00000011244
Pumilio RNA-binding family member 1.
     
 0.826
ENSGMOP00000005560
Capicua transcriptional repressor b.
    
 
 0.711
ENSGMOP00000021078
annotation not available
    
 
 0.711
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.