usp12 protein (Gadus morhua) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

usp12

Ubiquitin specific peptidase 12. (372 aa)

Predicted Functional Partners:

wdr48

0.965

ENSGMOP00000008514

0.892

ENSGMOP00000009984

0.892

ENSGMOP00000016287

0.885

ENSGMOP00000012733

0.857

ENSGMOP00000008109

0.851

ENSGMOP00000008395

0.826

ENSGMOP00000008679

0.806

pcna

0.768

ENSGMOP00000006005

0.725

Your Current Organism:

Gadus morhua

NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSGMOP00000006005	ENSGMOP00000008109	ENSGMOP00000006005	ENSGMOP00000008109	annotation not available	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.969
ENSGMOP00000006005	ENSGMOP00000008395	ENSGMOP00000006005	ENSGMOP00000008395	annotation not available	FA complementation group D2.	0.904
ENSGMOP00000006005	ENSGMOP00000008514	ENSGMOP00000006005	ENSGMOP00000008514	annotation not available	DM1 locus, WD repeat containing.	0.478
ENSGMOP00000006005	ENSGMOP00000008679	ENSGMOP00000006005	ENSGMOP00000008679	annotation not available	FA complementation group I.	0.903
ENSGMOP00000006005	ENSGMOP00000009984	ENSGMOP00000006005	ENSGMOP00000009984	annotation not available	WD repeat domain 20a.	0.478
ENSGMOP00000006005	ENSGMOP00000012733	ENSGMOP00000006005	ENSGMOP00000012733	annotation not available	Ribosomal protein S27a.	0.956
ENSGMOP00000006005	ENSGMOP00000016287	ENSGMOP00000006005	ENSGMOP00000016287	annotation not available	WD repeat domain 20b.	0.478
ENSGMOP00000006005	pcna	ENSGMOP00000006005	ENSGMOP00000014699	annotation not available	Proliferating cell nuclear antigen.	0.872
ENSGMOP00000006005	usp12	ENSGMOP00000006005	ENSGMOP00000016415	annotation not available	Ubiquitin specific peptidase 12.	0.725
ENSGMOP00000006005	wdr48	ENSGMOP00000006005	ENSGMOP00000004685	annotation not available	WD repeat domain 48.	0.864
ENSGMOP00000008109	ENSGMOP00000006005	ENSGMOP00000008109	ENSGMOP00000006005	Ubiquitin A-52 residue ribosomal protein fusion product 1.	annotation not available	0.969
ENSGMOP00000008109	ENSGMOP00000008395	ENSGMOP00000008109	ENSGMOP00000008395	Ubiquitin A-52 residue ribosomal protein fusion product 1.	FA complementation group D2.	0.945
ENSGMOP00000008109	ENSGMOP00000008514	ENSGMOP00000008109	ENSGMOP00000008514	Ubiquitin A-52 residue ribosomal protein fusion product 1.	DM1 locus, WD repeat containing.	0.583
ENSGMOP00000008109	ENSGMOP00000008679	ENSGMOP00000008109	ENSGMOP00000008679	Ubiquitin A-52 residue ribosomal protein fusion product 1.	FA complementation group I.	0.945
ENSGMOP00000008109	ENSGMOP00000009984	ENSGMOP00000008109	ENSGMOP00000009984	Ubiquitin A-52 residue ribosomal protein fusion product 1.	WD repeat domain 20a.	0.583
ENSGMOP00000008109	ENSGMOP00000012733	ENSGMOP00000008109	ENSGMOP00000012733	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ribosomal protein S27a.	0.999
ENSGMOP00000008109	ENSGMOP00000016287	ENSGMOP00000008109	ENSGMOP00000016287	Ubiquitin A-52 residue ribosomal protein fusion product 1.	WD repeat domain 20b.	0.583
ENSGMOP00000008109	pcna	ENSGMOP00000008109	ENSGMOP00000014699	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Proliferating cell nuclear antigen.	0.971
ENSGMOP00000008109	usp12	ENSGMOP00000008109	ENSGMOP00000016415	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ubiquitin specific peptidase 12.	0.851
ENSGMOP00000008109	wdr48	ENSGMOP00000008109	ENSGMOP00000004685	Ubiquitin A-52 residue ribosomal protein fusion product 1.	WD repeat domain 48.	0.952