STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016427Zgc:162171. (218 aa)    
Predicted Functional Partners:
ENSGMOP00000008695
Rab geranylgeranyltransferase subunit alpha.
    
 0.771
ENSGMOP00000017805
Cyclin G associated kinase.
    
 
 0.741
ENSGMOP00000006058
annotation not available
    
 0.739
ENSGMOP00000016803
Protein prenyltransferase alpha subunit repeat containing 1.
    
 0.672
ENSGMOP00000014463
annotation not available
    
 
 0.663
ENSGMOP00000014582
annotation not available
    
 
 0.663
ENSGMOP00000019726
HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.
     
 0.620
ENSGMOP00000002675
GDP dissociation inhibitor 2.
    
 0.606
LOC115557592
Rab GDP dissociation inhibitor alpha.
    
 0.606
ENSGMOP00000008751
Zgc:112334.
    
 0.606
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.