STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016492annotation not available (1377 aa)    
Predicted Functional Partners:
ENSGMOP00000011583
annotation not available
    
  0.576
ENSGMOP00000002756
Procollagen C-endopeptidase enhancer 2b.
    
 0.551
ENSGMOP00000000371
annotation not available
   
  0.531
ENSGMOP00000004553
Collagen, type VI, alpha 1.
  
 
0.527
ENSGMOP00000019980
annotation not available
  
     0.513
ENSGMOP00000017367
C1q and TNF related 2.
  
     0.507
ENSGMOP00000013604
annotation not available
  
 
0.505
ENSGMOP00000003984
Ligase I, DNA, ATP-dependent.
    
 0.501
ENSGMOP00000004481
Collagen, type VI, alpha 2.
  
 
0.500
ENSGMOP00000015583
annotation not available
  
 
0.492
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.