STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRDProtein tyrosine phosphatase receptor type D. (1915 aa)    
Predicted Functional Partners:
ENSGMOP00000018165
annotation not available
    
 0.857
SLITRK1
SLIT and NTRK like family member 1.
    
 0.799
ENSGMOP00000002126
annotation not available
    
 0.765
ENSGMOP00000007845
Neurotrophic tyrosine kinase, receptor, type 1.
    
 0.765
ENSGMOP00000015242
annotation not available
    
0.765
ENSGMOP00000015462
Neurotrophic tyrosine kinase, receptor, type 2b.
    
0.765
ENSGMOP00000019728
Neurotrophic tyrosine kinase, receptor, type 3a.
    
 0.765
CTNNB1
Catenin beta 1.
   
 0.758
ENSGMOP00000018213
annotation not available
   
  0.715
PTK7
Protein tyrosine kinase 7 (inactive).
    
0.700
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.