STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMP5Lysosomal associated membrane protein family member 5. (258 aa)    
Predicted Functional Partners:
nprl2
NPR2 like, GATOR1 complex subunit.
    
 
 0.651
ENSGMOP00000014099
Regulatory associated protein of MTOR, complex 1.
    
 
 0.642
ENSGMOP00000017796
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 
 0.642
ENSGMOP00000004457
NPR3-like, GATOR1 complex subunit.
    
 
 0.635
ENSGMOP00000018095
WD repeat domain 24.
    
 
 0.632
ENSGMOP00000006938
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
   0.620
ENSGMOP00000007437
DEP domain containing 5, GATOR1 subcomplex subunit.
    
   0.620
SZT2
SZT2 subunit of KICSTOR complex.
    
   0.620
ENSGMOP00000011384
WD repeat domain 59.
    
   0.620
ENSGMOP00000012041
Kaptin (actin binding protein).
    
   0.620
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.