STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016628annotation not available (411 aa)    
Predicted Functional Partners:
ift81
Intraflagellar transport 81.
    
 0.632
ENSGMOP00000008547
methionyl-tRNA synthetase 1.
   
 0.625
ENSGMOP00000011181
UBX domain protein 7.
    
 0.605
ENSGMOP00000011994
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.605
ENSGMOP00000017000
Intraflagellar transport 88 homolog.
   
 0.603
ENSGMOP00000015439
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.597
ENSGMOP00000019487
TNF receptor-associated factor 7.
    
  0.596
rps3
Ribosomal protein S3.
    
 0.590
ENSGMOP00000010257
Fleer.
    
 0.589
ENSGMOP00000018797
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.585
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.