STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016653Si:dkey-11k2.7. (330 aa)    
Predicted Functional Partners:
ENSGMOP00000012517
Fumarate hydratase.
   
  0.695
ENSGMOP00000010004
succinate-CoA ligase, alpha subunit.
   
 
  0.649
ENSGMOP00000020278
Methionyl aminopeptidase type 1D (mitochondrial).
  
  
 0.597
ENSGMOP00000003241
Glutamic-oxaloacetic transaminase 2b, mitochondrial.
   
  0.539
ENSGMOP00000010251
Succinate dehydrogenase complex, subunit A, flavoprotein (Fp).
    
  0.537
ENSGMOP00000006997
Succinate dehydrogenase complex, subunit C, integral membrane protein.
    
  0.532
ENSGMOP00000006043
Catalase.
  
  
 0.520
ENSGMOP00000015177
Vesicle amine transport 1.
 
  
 0.505
AKR1D1
Aldo-keto reductase family 1 member D1.
  
 
 0.499
ENSGMOP00000004401
Zgc:56622.
  
 
 0.499
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.