STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016655THO complex 3. (180 aa)    
Predicted Functional Partners:
ENSGMOP00000000084
THO complex 2.
    
 0.990
ENSGMOP00000012289
THO complex 1.
    
 0.990
ENSGMOP00000009737
THO complex 7.
   
 0.982
ENSGMOP00000005160
THO complex 5.
    
 0.980
ENSGMOP00000016206
THO complex 6.
   
 0.980
ENSGMOP00000010571
Aly/REF export factor.
   
 0.964
ENSGMOP00000000747
annotation not available
    
 0.962
ENSGMOP00000014026
annotation not available
   
 0.952
ENSGMOP00000012069
annotation not available
    
 0.900
DDX39A
DExD-box helicase 39A.
    
 0.900
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.