STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016737Contactin associated protein 1. (1178 aa)    
Predicted Functional Partners:
ENSGMOP00000011040
annotation not available
   
 0.935
ENSGMOP00000016695
Neurofascin homolog (chicken) a.
   
 0.933
CNTN1
Contactin 1.
   
 0.899
ENSGMOP00000020225
Contactin 1b.
   
 0.899
ENSGMOP00000016744
Contactin 2.
   
 0.796
ENSGMOP00000006483
annotation not available
   
 0.649
ENSGMOP00000007390
Contactin 4.
   
 0.649
ENSGMOP00000007680
annotation not available
   
 0.649
ENSGMOP00000007815
Contactin 3b.
   
 0.649
ENSGMOP00000009524
annotation not available
   
 0.649
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.