STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016789Niemann-Pick disease, type C2. (149 aa)    
Predicted Functional Partners:
ENSGMOP00000012141
Niemann-Pick disease, type C1.
   
 0.987
NPC1L1
NPC1 like intracellular cholesterol transporter 1.
   
 0.985
ENSGMOP00000017091
SREBF chaperone.
   
 0.949
ENSGMOP00000007276
Apolipoprotein Bb, tandem duplicate 2.
     
 0.652
ENSGMOP00000007304
annotation not available
     
 0.652
ENSGMOP00000007321
annotation not available
     
 0.652
ENSGMOP00000018738
Apolipoprotein Ba.
     
 0.652
ENSGMOP00000014911
Sphingomyelin phosphodiesterase acid like 3A.
   
 
  0.645
ENSGMOP00000009686
Patched domain containing 4.
   
 
  0.640
LOC115549252
Patched domain-containing protein 3-like.
   
 
  0.640
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.