STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016811Solute carrier family 4 member 8. (1070 aa)    
Predicted Functional Partners:
ENSGMOP00000010542
Ras homolog family member F.
    
  0.606
ENSGMOP00000005233
Valosin containing protein.
    
  0.590
ENSGMOP00000004731
Dynein, axonemal, light intermediate chain 1.
   
  
 0.567
ENSGMOP00000018397
Family with sequence similarity 169 member B.
    
  0.563
ENSGMOP00000001537
Uveal autoantigen with coiled-coil domains and ankyrin repeats b.
    
  0.556
ENSGMOP00000014526
Cytochrome b5 domain containing 1.
   
  
 0.551
ENSGMOP00000015437
annotation not available
     
 0.523
ENSGMOP00000013597
5-methyltetrahydrofolate-homocysteine methyltransferase.
   
 
  0.514
ENSGMOP00000001167
Ras homolog family member H.
    
  0.509
ENSGMOP00000007271
Ras homolog family member Q.
    
  0.509
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.