STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016832General transcription factor IIIC, polypeptide 3. (852 aa)    
Predicted Functional Partners:
ENSGMOP00000020561
General transcription factor IIIC, polypeptide 5.
   
 0.999
ENSGMOP00000006679
Polymerase (RNA) III (DNA directed) polypeptide D.
    
 0.988
ENSGMOP00000009819
BRF1 RNA polymerase III transcription initiation factor subunit b.
    
 0.980
ENSGMOP00000019683
annotation not available
    
 0.980
ENSGMOP00000008658
Zgc:162472.
   
 0.976
ENSGMOP00000016967
Zgc:171971.
    
 0.970
ENSGMOP00000004516
annotation not available
    
 0.967
ENSGMOP00000010719
BRF2 RNA polymerase III transcription initiation factor subunit.
    
 0.963
ENSGMOP00000009381
Cleavage and polyadenylation specific factor 2.
   
   0.960
ENSGMOP00000000852
Cleavage and polyadenylation specific factor 1.
    
   0.957
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.