STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016938Integrin, alpha V. (1038 aa)    
Predicted Functional Partners:
ENSGMOP00000019029
Integrin, beta 8.
    
 0.928
ENSGMOP00000000540
Integrin, beta 6.
   
 0.927
ENSGMOP00000008889
Fibronectin 1a.
    
 0.903
ENSGMOP00000002944
Integrin, beta 5.
   
 0.896
ENSGMOP00000002985
Integrin, beta 1a.
   
 0.871
ENSGMOP00000017523
Integrin, beta 1b.
   
 0.871
LAMA2
Laminin subunit alpha 2.
   
 0.865
ENSGMOP00000019803
Transforming growth factor, beta 1a.
   
 0.858
ENSGMOP00000000457
annotation not available
    
 0.854
ENSGMOP00000000476
annotation not available
    
 0.854
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.