STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016947Glutamate receptor, metabotropic 5a. (1161 aa)    
Predicted Functional Partners:
HOMER1
Homer scaffold protein 1.
    
 0.886
ENSGMOP00000008098
Homer scaffold protein 3b.
    
 0.869
HOMER2
Homer scaffold protein 2.
    
  0.811
ENSGMOP00000011494
Homer scaffold protein 1b.
    
  0.810
ENSGMOP00000005393
annotation not available
    
 0.806
ENSGMOP00000005408
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.806
ENSGMOP00000012359
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2.
   
  0.792
ENSGMOP00000002251
annotation not available
   
  0.788
ENSGMOP00000000110
Coagulation factor II (thrombin).
    
  0.774
ENSGMOP00000010371
Glutamate receptor, metabotropic 1a.
  
  
 
0.774
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.