STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP13A3ATPase 13A3. (1213 aa)    
Predicted Functional Partners:
ENSGMOP00000017805
Cyclin G associated kinase.
   
 
 0.712
ENSGMOP00000010713
NME/NM23 family member 8.
   
 0.644
ENSGMOP00000006215
DnaJ (Hsp40) homolog, subfamily C, member 6.
   
 
 0.615
ENSGMOP00000005627
annotation not available
  
0.571
ENSGMOP00000017533
ATPase copper transporting alpha.
  
 0.571
ENSGMOP00000011278
Transmembrane protein 30Ab.
    
 0.552
ENSGMOP00000017863
Transmembrane protein 30Aa.
    
 0.552
ENSGMOP00000017944
Transmembrane protein 30C.
    
 0.552
ENSGMOP00000020259
Transmembrane protein 30B.
    
 0.552
ENSGMOP00000013483
Ferrochelatase.
 
   
  0.550
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.