STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016967Zgc:171971. (307 aa)    
Predicted Functional Partners:
ENSGMOP00000018961
Polymerase (RNA) III (DNA directed) polypeptide E.
   
 0.986
ENSGMOP00000000296
Polymerase (RNA) III (DNA directed) polypeptide A.
   
 0.985
polr3c
RNA polymerase III subunit C.
   
 0.983
ENSGMOP00000000204
Polymerase (RNA) III (DNA directed) polypeptide F.
   
 0.982
ENSGMOP00000014826
RNA polymerase I and III subunit C.
   
 0.982
ENSGMOP00000002049
Polymerase (RNA) III (DNA directed) polypeptide H.
   
 0.981
polr3k
RNA polymerase III subunit K.
   
 0.981
polr3b
RNA polymerase III subunit B.
   
 0.980
ENSGMOP00000012137
Calcitonin gene-related peptide-receptor component protein.
    
 0.980
polr2l
RNA polymerase II subunit L.
    
 0.979
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.