STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016996Transcription factor A, mitochondrial. (267 aa)    
Predicted Functional Partners:
ENSGMOP00000012665
Polymerase (RNA) mitochondrial (DNA directed).
    
 0.992
ENSGMOP00000014599
Transcription factor B2, mitochondrial.
    
 0.989
ENSGMOP00000015387
annotation not available
     
 0.921
gtf2h1
General transcription factor IIH subunit 1.
    
 0.804
ENSGMOP00000020132
Transcription factor B1, mitochondrial.
   
 0.802
actr8
Actin related protein 8.
    
 0.790
ENSGMOP00000009074
General transcription factor IIH, polypeptide 4.
    
 0.777
ENSGMOP00000016714
Nuclear respiratory factor 1.
     
 0.760
gtf2h3
General transcription factor IIH subunit 3.
    
 0.750
ENSGMOP00000019094
annotation not available
   
    0.749
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.