STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000017047Metabolism of cobalamin associated C. (250 aa)    
Predicted Functional Partners:
ENSGMOP00000013597
5-methyltetrahydrofolate-homocysteine methyltransferase.
   
 0.851
ENSGMOP00000006037
Glutamate-cysteine ligase, catalytic subunit.
   
 0.834
ENSGMOP00000008569
annotation not available
    
 0.829
ENSGMOP00000011955
Metabolism of cobalamin associated D.
    
 0.829
ENSGMOP00000009285
triokinase/FMN cyclase.
  
 
 0.820
ENSGMOP00000020907
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
     
 0.816
ENSGMOP00000014543
Aldehyde dehydrogenase 7 family, member A1.
  
 0.779
ENSGMOP00000014368
annotation not available
   
 
 0.751
ENSGMOP00000009186
annotation not available
  
 
 0.748
ENSGMOP00000009579
Sepiapterin reductase a.
  
 
 0.744
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.