STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000017082annotation not available (252 aa)    
Predicted Functional Partners:
ENSGMOP00000009653
Cyclin-dependent kinase 9 (CDC2-related kinase).
   
 0.955
ENSGMOP00000000160
Cyclin-dependent kinase 12.
   
 0.943
ENSGMOP00000010202
annotation not available
   
 0.943
ENSGMOP00000017776
annotation not available
   
 0.943
ENSGMOP00000008275
Polymerase (RNA) II (DNA directed) polypeptide A.
   
 0.906
ENSGMOP00000018748
annotation not available
   
 0.903
ENSGMOP00000003655
SPT5 homolog, DSIF elongation factor subunit.
    
 0.867
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.851
supt4h1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.834
ENSGMOP00000017581
CCR4-NOT transcription complex, subunit 2.
   
   0.826
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.