STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000017118mutS homolog 6 (E. coli). (1374 aa)    
Predicted Functional Partners:
ENSGMOP00000006948
mutS homolog 2 (E. coli).
  
0.999
pcna
Proliferating cell nuclear antigen.
  
 0.999
ENSGMOP00000017568
mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli).
 
 0.996
ENSGMOP00000007595
mutS homolog 3 (E. coli).
  
 
0.995
ENSGMOP00000004581
PMS1 homolog 2, mismatch repair system component.
  
 0.992
ENSGMOP00000000242
Exonuclease 1.
  
 0.988
ENSGMOP00000013526
PMS1 homolog 1, mismatch repair system component.
 
 0.985
ENSGMOP00000011113
Replication protein A1.
   
 0.972
ENSGMOP00000001686
annotation not available
  
 0.969
ENSGMOP00000013726
Polymerase (DNA directed), alpha 1.
  
 
 0.956
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.