STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR37WD repeat domain 37. (498 aa)    
Predicted Functional Partners:
ENSGMOP00000014786
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.824
ENSGMOP00000008767
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.805
wdr48
WD repeat domain 48.
    
 0.801
PACS1
Phosphofurin acidic cluster sorting protein 1.
    
 
 0.794
ENSGMOP00000019772
annotation not available
    
 
 0.794
ENSGMOP00000020687
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.792
ENSGMOP00000014497
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.791
ENSGMOP00000008097
TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.789
ENSGMOP00000016244
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.789
ENSGMOP00000017484
TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.783
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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